Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
415
RNA-seq
305
single cell RNA-seq
147
scRNA-seq
84
snDropSeq
18
DNase-seq
10
ATAC-seq
4
snATAC-seq
2
ChIP-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
hg19
980
GRCh38
1
hg18
Organism
2
Homo sapiens
Biosample type
1
cell line
1
in vitro differentiated cells
Biosample term
1
HepG2
1
neural progenitor cell
Organ
1
liver
Date released
2
August, 2021
Software used
1
cisgenome
1
e-range
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
assembly!
hg19
biosample_term_name!
HCT-116 cell
lab.title!
Karen Mohlke, UNC
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR366OIY
released
Annotation file set
: Binding sites of ChREBP, TF for liver lipogenesis, in HepG2 cells(PMID:21811631)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR680UFD
released
Annotation file set
: Histone modifications annotation of H3K27me3 ChIPseq of neural progenitor cells differentiated into neural lineage until appropriate time points (6 hours).
Lab:
AMP-T2D consortium
Project:
AMP