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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
chromatin state
1
candidate regulatory elements
1
histone modifications
1
target gene predictions
Annotation Category
6
cis-regulatory elements
1
Target gene links
Annotation type Category
37
HiC
8
RNA-seq
7
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
1
bed bed9
File set status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
6
cell line
1
stem cell
Biosample term
20
trophoblast cell
16
chorionic villus
10
endodermal cell
9
H9
9
trophoblast
8
mesodermal cell
7
H1-hESC
5
HUES6
5
HUES64
5
ectodermal cell
4
ELF-1
4
H4
4
H7-hESC
4
HUES48
4
UCSF-4
3
ES-I3
3
cardiac mesoderm primordium
3
embryonic facial prominence
2
first pancreatic bud
2
hESC H9
2
primordial germ cell
1
CyT49
1
H1
1
H7
1
HUES8
1
cardiogenic mesoderm
1
embryonic fibroblast
1
morula
Organ
7
embryo
Life stage
4
embryonic
Date released
3
September, 2022
2
February, 2021
1
August, 2017
1
October, 2022
Software used
3
chromhmm
2
macs
2
r
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
organ_slims!
pericardium
Showing 7 of 7 results
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Download
FileSet
DSR876GWY
released
Annotation file set
: Binding sites annotation for H1-hESC (H1-hESC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR748AAQ
released
Annotation file set
: Target gene predictions for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR416QNM
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR188ZAX
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP