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Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
8
snATAC-seq
6
scRNA-seq
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
16
body of pancreas
15
endocrine pancreas
12
pancreas
6
islet of Langerhans
4
Panc1
4
pancreatic ductal cell
3
8988T
3
HPDE6-E6E7
1
pancreatic acinar cell
1
pancreatic endocrine cell
Disease term
3
pancreatic ductal adenocarcinoma
Organ
4
pancreas
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
November, 2021
Showing 4 of 4 results
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Download
FileSet
DSR623CCG
released
Annotation file set
: Candidate regulatory elements for BSS01405 Panc1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR898MBY
released
Annotation file set
: Target gene predictions for BSS01405 Panc1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR991ZNU
released
Annotation file set
: Chromatin states for BSS01405 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014CHT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Panc1
Lab:
AMP-T2D consortium
Project:
AMP