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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
5
DNase-seq
3
ChIP-seq
Available data
3
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
49
brain
12
layer of hippocampus
10
caudate nucleus
9
substantia nigra
9
temporal lobe
7
SK-N-DZ
7
SK-N-SH
7
cingulate gyrus
6
SK-N-MC
6
angular gyrus
6
cerebellum
6
choroid plexus epithelial cell
BE(2)-C
4
Brodmann (1909) area 46
4
Daoy
4
frontal cortex
4
globus pallidus
4
midbrain
4
putamen
3
A172
3
Ammon's horn
3
H54
3
M059J
3
U-87 MG
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
brain microvascular endothelial cell
3
cerebellar cortex
3
medulloblastoma
3
middle frontal gyrus
2
inferior parietal cortex
2
medulla oblongata
2
middle frontal area 46
2
pons
2
prefrontal cortex
1
BE2C
1
Brodmann (1909) area 9
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
brain pericyte
1
cardiac fibroblast
1
claustrum of brain
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
frontal pole
1
hypothalamus
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
mid-frontal lobe
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
Organ
3
brain
Life stage
3
unknown
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
BE(2)-C
Showing 3 of 3 results
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Download
FileSet
DSR489AIN
released
Annotation file set
: Candidate regulatory elements for BSS00091 astrocyte of the hippocampus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR113KBA
released
Annotation file set
: Target gene predictions for BSS00091 astrocyte of the hippocampus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR990VSV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE astrocyte of the hippocampus
Lab:
AMP-T2D consortium
Project:
AMP