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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
22
snATAC-seq
7
ATAC-seq
6
scRNA-seq
4
RNA-seq
3
ChIP-seq
1
snRNA-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
89
monocyte
79
heart
79
stomach
67
brain
65
lung
65
muscle of arm
62
kidney
60
A549
59
small intestine
57
placenta
56
adrenal gland
55
muscle of leg
54
large intestine
muscle of back
53
common myeloid progenitor, CD34-positive
52
left lung
44
right lung
44
thymus
41
hematopoietic multipotent progenitor cell
40
right kidney
38
CD8-positive, alpha-beta T cell
38
renal cortex interstitium
37
renal pelvis
36
left kidney
33
neural progenitor cell
32
B cell
32
CD4-positive, alpha-beta memory T cell
32
liver
31
spinal cord
28
spleen
25
heart left ventricle
24
MCF-7
23
K562
22
CD8-positive, alpha-beta memory T cell
21
foreskin keratinocyte
20
breast cancer cell
20
mononuclear cell
20
sigmoid colon
19
adipose tissue
19
trophoblast cell
17
foreskin fibroblast
16
CD14-positive monocyte
16
body of pancreas
16
chorionic villus
16
muscle of trunk
15
fibroblast of lung
15
gastrocnemius medialis
15
keratinocyte
15
layer of hippocampus
15
ovary
15
psoas muscle
15
thyroid gland
15
transverse colon
15
upper lobe of left lung
14
endocrine pancreas
14
endothelial cell of umbilical vein
14
testis
13
HepG2
13
adipocyte
13
neurosphere
13
retina
13
skeletal muscle tissue
13
tibial nerve
12
HeLa-S3
Peyer's patch
12
T cell
12
bronchial epithelial cell
12
caudate nucleus
12
fibroblast of cardiac tissue
12
heart right ventricle
12
hepatocyte
12
mammary gland epithelial cell
12
natural killer cell
12
neuroblastoma cell
12
regulatory T cell
11
CD4-positive, alpha-beta T cell
11
T-helper 17 cell
11
cardiac muscle cell
11
fibroblast of dermis
11
prostate gland
11
skeletal muscle myoblast
11
temporal lobe
10
22Rv1
10
T-helper 1 cell
10
T-helper 2 cell
10
gastric cancer cell
10
mammary epithelial cell
10
substantia nigra
9
H9
9
Rhabdomyosarcoma
9
aorta
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
esophagus squamous epithelium
9
left renal cortex interstitium
9
liposarcoma
9
mesenchymal stem cell
9
neutrophil
9
osteoblast
9
pancreas
9
parathyroid adenoma
9
right renal cortex interstitium
8
GM12878
8
HEK293
8
breast epithelium
8
cingulate gyrus
8
coronary artery
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
immortal human breast epithelial cell line cell
8
lower leg skin
8
myoepithelial cell of mammary gland
8
naive T cell
8
neuronal stem cell
8
omental fat pad
8
right renal pelvis
8
thoracic aorta
8
tongue
7
B-lymphoblastoid cell line
7
GM06990
7
GM12864
7
GM12865
7
GM12875
7
H1-hESC
7
HL-60
7
IMR-90
7
LNCaP clone FGC
7
NAMALWA cell
7
SK-N-DZ
7
SK-N-MC
7
SK-N-SH
7
T47D
7
angular gyrus
7
cerebellum
7
dermis lymphatic vessel endothelial cell
7
embryonic stem cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
eye
7
fibroblast cell line
7
foreskin melanocyte
7
left cardiac atrium
7
left renal pelvis
7
limb
7
mature neutrophil
7
stomach smooth muscle
7
tibial artery
7
trophoblast
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Brodmann (1909) area 46
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM08714
6
GM12891
6
GM12892
6
GM19238
6
GM19239
6
GM19240
6
GM23248
6
HAP-1
6
HT-29
6
KARPAS-422 cell
6
LHCN-M2
6
MG63
6
MM.1S
6
WERI-Rb-1
6
WI38
6
ascending aorta
6
chorion membrane
6
esophagus
6
esophagus muscularis mucosa
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
hESC cell
6
kidney tubule cell
6
mesodermal cell
6
mucosa of rectum
6
neuroblastoma cell line
6
skin fibroblast
6
vagina
5
CD14-positive, CD16-negative classical monocyte
5
Daoy
5
Ewing sarcoma
5
GM10248
5
GM10266
5
HK-2 cell
5
HUES6
5
HUES64
5
HuH-7
Organ
3
epithelium
Date released
3
February, 2021
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
Peyer's patch
muscle of back
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR296FOQ
released
Annotation file set
: Histone modifications annotation for Cardiovascular Endothelial_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR406JQN
released
Annotation file set
: Binding sites annotation for Cardiovascular Primary_endothelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR388QAH
released
Annotation file set
: Binding sites annotation for Cardiovascular Endothelial_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP