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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
ChIP-seq
10
DNase-seq
9
RNA-seq
2
ATAC-seq
2
snATAC-seq
0
scRNA-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
15
CD14-positive monocyte
10
pituitary stalk
8
pancreatic ductal cell
7
dendritic cell
7
heart
7
hepatocyte
7
pancreatic acinar cell
6
endothelial cell
6
pancreas
6
pancreatic beta cell
6
pancreatic delta cell
5
cardiac fibroblast
5
adipocyte
5
pancreatic alpha cell
5
pancreatic stellate cell
5
stomach
4
CD8-positive, alpha-beta T cell
4
endothelial cell of umbilical vein
4
glomerular endothelial cell
4
glomerular visceral epithelial cell
4
hepatic stellate cell
4
kidney
4
macrophage
4
natural killer cell
4
osteoblast
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skeletal muscle myoblast
3
B cell
3
CD4-positive helper T cell
3
Jurkat
3
U937
3
adrenal gland
3
brain
3
brain pericyte
3
cardiac muscle cell
3
caudate nucleus
3
choroid plexus epithelial cell
3
coronary artery
3
epithelial cell of proximal tubule
3
frontal cortex
3
globus pallidus
3
heart left ventricle
3
heart right ventricle
3
kidney interstitial cell
3
left cardiac atrium
3
medulla oblongata
3
midbrain
3
monocyte
3
muscle of leg
3
nephron progenitor
3
occipital lobe
3
pancreatic quiescent stellate cell
3
pons
3
putamen
3
renal cortical epithelial cell
3
renal pelvis
3
retina
3
right atrium auricular region
3
spinal cord
3
superior temporal gyrus
3
tibial artery
3
tibial nerve
3
trophoblast cell
2
hindlimb muscle
2
muscle of leg
2
A549
2
Ammon's horn
2
BJAB cell
2
GM12878
2
H1-hESC
2
H7-hESC
2
HAP-1
2
HCT-116 cell
2
HT-29
2
HepG2
2
IMR-90
2
K562
2
KARPAS-422 cell
2
Kupffer cell
2
LNCAP
2
LoVo cell
2
MCF 10A cell
2
MCF-7
2
MDA-MB-231 cell
2
MM.1S
2
NCCIT cell
2
OCI-LY7
2
PC-9
2
Rh-4 cell
2
S-shaped body
2
T-cell
2
THP-1
2
acute myeloid leukemia cell
2
ascending aorta
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
bipolar neuron
2
body of pancreas
2
bone marrow cell
2
breast epithelium
2
cardiomyocytes (cardiac muscle cell)
2
epithelial cell of prostate
2
erythroid cell
2
fibroblast of cardiac tissue
2
foreskin fibroblast
2
gamma-delta T cell
2
gastrocnemius medialis
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
large intestine
2
left renal cortex interstitium
2
left renal pelvis
2
liver
2
mammary epithelial cell
2
mesenchymal stem cell
2
mesendoderm
2
middle frontal gyrus
2
muscle of arm
2
neuronal stem cell
2
ovary
2
pancreatic polypeptide-secreting cell
2
placenta
2
psoas muscle
2
regulatory T cell
2
renal cortex interstitium
2
renal vesicle
2
retinal pigment epithelial cell
2
right kidney
2
right renal cortex interstitium
2
right renal pelvis
2
sigmoid colon
2
skeletal muscle cell
2
skin fibroblast
2
small intestine
2
smooth muscle cell of the brain vasculature
2
spleen
2
thymus
2
thyroid gland
2
transverse colon
2
uterus
1
brain microvascular endothelial cell
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
786-O cell
1
A-673 cell
1
A172
1
A673
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B cell, CD19-positive
1
B-1 B cell
1
B-2 B cell
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD56-positive, CD161-positive immature natural killer cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
Glioblastoma
1
H4
Date released
2
June, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type_category!
ChIP-seq
Showing 2 of 2 results
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Download
FileSet
DSR988CEW
released
Annotation file set
: Accessible chromatin annotation for Blood Treg Wb83319432 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR553AHW
released
Annotation file set
: Accessible chromatin annotation for Blood Treg from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP