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Schema
Citing CMDGA
Clear Filters
Annotation type
3
differential activity
3
gene expression
1
target gene predictions
Annotation Category
6
Gene expression levels
1
Target gene links
Annotation type Category
7
snATAC-seq
6
scRNA-seq
3
ATAC-seq
1
ChIP-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
5
tsv
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
1
hg19
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
64
stomach
63
heart
51
muscle of arm
lung
48
brain
47
kidney
46
small intestine
45
adrenal gland
43
muscle of leg
42
large intestine
42
placenta
41
A549
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
34
right lung
33
thymus
32
right kidney
31
renal cortex interstitium
31
renal pelvis
30
hematopoietic multipotent progenitor cell
27
CD14-positive monocyte
27
left kidney
25
B cell
24
spinal cord
23
CD4-positive, alpha-beta memory T cell
23
spleen
22
liver
19
heart left ventricle
17
sigmoid colon
17
trophoblast cell
16
MCF-7
16
foreskin keratinocyte
15
CD8-positive, alpha-beta memory T cell
15
K562
14
adipose tissue
14
body of pancreas
14
gastrocnemius medialis
14
ovary
14
thyroid gland
14
transverse colon
13
mononuclear cell
13
muscle of trunk
13
natural killer cell
13
pancreas
13
psoas muscle
12
chorionic villus
12
endothelial cell of umbilical vein
12
heart right ventricle
12
hepatocyte
12
retina
12
tibial nerve
11
CD8-positive, alpha-beta T cell
11
Peyer's patch
11
adipocyte
11
caudate nucleus
11
endocrine pancreas
11
foreskin fibroblast
11
testis
11
upper lobe of left lung
10
T-helper 1 cell
10
cardiac muscle cell
10
fibroblast of lung
10
left renal cortex interstitium
10
left renal pelvis
10
neurosphere
10
pituitary stalk
10
regulatory T cell
10
right renal pelvis
10
skeletal muscle myoblast
9
H9
9
HeLa-S3
9
T cell
9
T-helper 17 cell
9
breast epithelium
9
esophagus squamous epithelium
9
layer of hippocampus
9
neural progenitor cell
9
right renal cortex interstitium
9
skeletal muscle tissue
8
CD4-positive, alpha-beta T cell
8
T-helper 2 cell
8
ascending aorta
8
coronary artery
8
dermis blood vessel endothelial cell
8
epithelial cell of prostate
8
esophagus muscularis mucosa
8
fibroblast of cardiac tissue
8
fibroblast of dermis
8
lower leg skin
8
mesenchymal stem cell
8
omental fat pad
8
pancreatic ductal cell
8
right atrium auricular region
8
tibial artery
7
SK-N-DZ
7
SK-N-SH
7
aorta
7
bronchial epithelial cell
7
chorion membrane
7
dendritic cell
7
eye
7
frontal cortex
7
glomerular endothelial cell
7
glomerular visceral epithelial cell
7
kidney tubule cell
7
mammary gland epithelial cell
7
osteoblast
7
pancreatic acinar cell
7
parathyroid adenoma
7
prostate gland
7
substantia nigra
7
temporal lobe
7
tongue
7
trophoblast
6
22Rv1
6
T-cell
6
WI38
6
angular gyrus
6
cerebellum
6
choroid plexus epithelial cell
6
cingulate gyrus
6
colonic mucosa
6
duodenal mucosa
6
endodermal cell
6
endometrium adenocarcinoma
6
endothelial cell
6
epithelial cell of proximal tubule
6
esophagus
6
fibroblast of breast
6
foreskin melanocyte
6
gastroesophageal sphincter
6
globus pallidus
6
hepatic stellate cell
6
immortal human breast epithelial cell line cell
6
keratinocyte
6
left cardiac atrium
6
limb
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
pancreatic beta cell
6
pancreatic delta cell
6
putamen
6
renal cortical epithelial cell
6
skin fibroblast
6
stomach smooth muscle
6
thoracic aorta
6
urinary bladder
6
uterus
5
cardiac fibroblast
5
Ammon's horn
5
GM12878
5
HAP-1
5
HEK293
5
HT-29
5
HepG2
5
IMR-90
5
LNCaP clone FGC
5
MM.1S
5
NAMALWA cell
5
OCI-LY7
5
PC-9
5
T47D
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
bipolar neuron
5
kidney epithelial cell
5
kidney glomerular epithelial cell
5
mammary epithelial cell
5
medulla oblongata
5
mesendoderm
5
mesodermal cell
5
midbrain
5
middle frontal gyrus
5
occipital lobe
5
pancreatic alpha cell
5
pancreatic stellate cell
5
pons
5
retinal pigment epithelial cell
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
5
subcutaneous abdominal adipose tissue
5
superior temporal gyrus
5
vagina
4
A172
4
A673
4
ACHN
4
Brodmann (1909) area 46
4
CD1c-positive myeloid dendritic cell
4
CMK
4
Caki2
4
Daoy
4
GM04503
4
GM04504
4
GM06990
4
GM10248
Organ
7
epithelium
7
pancreas
Life stage
1
adult
Date released
4
March, 2023
2
May, 2021
1
August, 2018
Software used
6
r
1
abc
Lab
4
Kyle Gaulton, UCSD
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
biosample_term_name!
lung
Showing 7 of 7 results
table-tab-icon
matrix-icon
Download
FileSet
DSR792GEO
released
Annotation file set
: Differential activity within acinar in T2D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR008ZUM
released
Annotation file set
: Differential activity within acinar in T1D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR851ART
released
Annotation file set
: Differential activity within acinar in T1D Aab+
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR556ASG
released
Annotation file set
: Gene expression annotation of pancreatic acinar from single-cell transcriptome analysis
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR878FRU
released
Annotation file set
: GSE84133 Gene expression levels (pseudobulks UMI) of pancreatic acinar cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR328CUT
released
Annotation file set
: enhancer-gene predicton of pancreatic-acinar-cell-AMP from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
TSTSR393GVO
released
Annotation file set
: pancreatic acinar cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP