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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
16
RNA-seq
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
tissue
1
cell line
Biosample term
41
A549
41
common myeloid progenitor, CD34-positive
30
hematopoietic multipotent progenitor cell
27
CD14-positive monocyte
25
B cell
23
CD4-positive, alpha-beta memory T cell
17
trophoblast cell
16
MCF-7
16
foreskin keratinocyte
15
CD8-positive, alpha-beta memory T cell
15
K562
13
mononuclear cell
12
endothelial cell of umbilical vein
11
adipocyte
11
foreskin fibroblast
11
natural killer cell
10
CD8-positive, alpha-beta T cell
10
T-helper 1 cell
10
cardiac muscle cell
10
fibroblast of lung
10
neurosphere
10
pituitary stalk
10
regulatory T cell
10
skeletal muscle myoblast
9
H9
9
HeLa-S3
9
T cell
9
hepatocyte
9
neural progenitor cell
8
CD4-positive, alpha-beta T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
dermis blood vessel endothelial cell
8
epithelial cell of prostate
8
fibroblast of cardiac tissue
8
fibroblast of dermis
8
mesenchymal stem cell
7
SK-N-DZ
7
SK-N-SH
7
bronchial epithelial cell
7
kidney tubule cell
7
mammary gland epithelial cell
7
osteoblast
6
22Rv1
6
T-cell
6
WI38
6
choroid plexus epithelial cell
6
dendritic cell
6
endodermal cell
6
endometrium adenocarcinoma
6
fibroblast of breast
6
foreskin melanocyte
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
immortal human breast epithelial cell line cell
6
keratinocyte
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
renal cortical epithelial cell
6
skin fibroblast
5
cardiac fibroblast
5
GM12878
5
HAP-1
5
HEK293
5
HT-29
5
HepG2
5
IMR-90
5
LNCaP clone FGC
5
MM.1S
5
NAMALWA cell
5
OCI-LY7
5
PC-9
5
T47D
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
bipolar neuron
5
epithelial cell of proximal tubule
5
hepatic stellate cell
5
kidney epithelial cell
5
kidney glomerular epithelial cell
5
mammary epithelial cell
5
mesendoderm
5
mesodermal cell
5
retinal pigment epithelial cell
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
4
A172
4
A673
4
ACHN
4
CD1c-positive myeloid dendritic cell
4
CMK
4
Caki2
4
Daoy
4
GM04503
4
GM04504
4
GM06990
4
GM10248
4
GM10266
4
GM12864
GM12865
4
GM23248
4
H1-hESC
4
H4
4
H7-hESC
4
HL-60
4
HUES6
4
KARPAS-422 cell
4
KBM-7
4
L1-S8
4
LHCN-M2
4
LNCAP
4
LoVo cell
4
M059J
4
MG63
4
PC-3
4
Panc1
4
RCC 7860
4
RPMI7951
4
RPMI8226
4
RWPE1
4
SJCRH30
4
SJSA1
4
SK-N-MC
4
SW480
4
WERI-Rb-1
4
astrocyte
4
brain microvascular endothelial cell
4
brain pericyte
4
dermis lymphatic vessel endothelial cell
4
fibroblast of mammary gland
4
fibroblast of peridontal ligament
4
fibroblast of pulmonary artery
4
fibroblast of the conjunctiva
4
fibroblast of villous mesenchyme
4
iPS DF 19.11
4
iris pigment epithelial cell
4
kidney capillary endothelial cell
4
lung microvascular endothelial cell
4
muscle cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neural cell
4
neuronal stem cell
4
non-pigmented ciliary epithelial cell
4
peripheral blood mononuclear cell
4
pulmonary artery endothelial cell
3
ACC112
3
AG04449 cell
3
AG04450 cell
3
AG08396 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
C4-2B
3
CD4-positive helper T cell
3
Caco-2 cell
3
DND-41
3
DOHH2
3
EH
3
EL
3
ELF-1
3
ELR
3
G401
3
GM03348
3
GM08714
3
GM12875
3
GM18507
3
GM19240
3
GM23338
3
H54
3
HCT116
3
HS-27A
3
HS-5
3
HT1080
3
HUES48
3
HUES64
3
HuH-7
3
Jurkat
3
KMS-11
3
KOPT-K1
3
L1-S8R
3
Loucy
3
MCF 10A
3
NB4
3
NCI-H226 cell
3
NCI-H929
3
NT2-D1 cell
3
OCI-LY1
3
OCI-LY3
3
RWPE2
3
SK-MEL-5
3
SU-DHL-6
3
U937
3
UCSF-4
3
astrocyte of the spinal cord
3
cardiac fibroblast
3
dermis microvascular lymphatic vessel endothelial cell
3
ectodermal cell
Date released
1
May, 2021
Software used
1
abc
Lab
1
Jesse Engreitz, Stanford University
Project
1
AMP
RFA
1
AMP
biosample_term_name!
GM12865
biosample_type!
tissue
Showing 1 of 1 results
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Download
FileSet
DSR384JYX
released
Annotation file set
: enhancer-gene predicton of induced_pluripotent_stem_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP