Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
RNA-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
21
stomach
20
heart
18
muscle of arm
17
kidney
17
lung
15
muscle of back
15
muscle of leg
14
adrenal gland
14
brain
14
common myeloid progenitor, CD34-positive
14
large intestine
14
small intestine
13
left lung
12
placenta
12
renal cortex interstitium
11
renal pelvis
11
right lung
10
right kidney
9
hematopoietic multipotent progenitor cell
9
left kidney
9
spleen
9
thymus
8
CD4-positive, alpha-beta T cell
8
heart left ventricle
7
CD8-positive, alpha-beta T cell
7
foreskin keratinocyte
7
spinal cord
6
H9
6
cardiac muscle cell
6
liver
5
B cell
5
CD4-positive, alpha-beta memory T cell
5
foreskin fibroblast
5
left renal pelvis
5
pancreas
5
right renal pelvis
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
4
CD14-positive monocyte
4
MCF-7
4
Peyer's patch
4
T-cell
4
WI38
4
body of pancreas
4
chorionic villus
4
dermis blood vessel endothelial cell
4
endothelial cell of umbilical vein
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
heart right ventricle
4
left renal cortex interstitium
4
lower leg skin
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neurosphere
4
omental fat pad
4
ovary
4
peripheral blood mononuclear cell
4
retina
4
testis
4
thyroid gland
4
tibial nerve
4
transverse colon
4
trophoblast cell
4
upper lobe of left lung
3
cardiac fibroblast
3
A549
3
MCF 10A
3
T-helper 1 cell
3
ascending aorta
3
breast epithelium
3
cardiac fibroblast
3
caudate nucleus
3
endocrine pancreas
3
esophagus muscularis mucosa
3
fibroblast of lung
3
foreskin melanocyte
3
layer of hippocampus
3
mammary epithelial cell
3
mesodermal cell
3
natural killer cell
3
parathyroid adenoma
3
psoas muscle
3
right renal cortex interstitium
3
skeletal muscle tissue
3
substantia nigra
3
suprapubic skin
3
temporal lobe
2
22Rv1
2
AG10803
2
Ammon's horn
2
HEK293
2
HeLa-S3
2
LNCAP
2
NAMALWA
2
SK-N-DZ
2
SK-N-SH
2
T-helper 17 cell
2
T-helper 2 cell
2
adipocyte
2
angular gyrus
2
aorta
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
brain microvascular endothelial cell
2
brain pericyte
2
bronchial epithelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
cerebellar cortex
2
cerebellum
2
chorion
2
choroid plexus epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
dermis microvascular lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
esophagus
2
eye
2
fibroblast of breast
2
forelimb muscle
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hepatocyte
2
kidney epithelial cell
2
kidney tubule cell
2
left cardiac atrium
2
lung microvascular endothelial cell
2
mesenchymal stem cell
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myocyte
2
myoepithelial cell of mammary gland
2
neural cell
2
neuroepithelial stem cell
2
neuronal stem cell
2
neutrophil
2
placental basal plate
2
prostate gland
2
putamen
2
regulatory T cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
right atrium auricular region
2
skeletal muscle cell
2
skeletal muscle myoblast
2
smooth muscle cell of the brain vasculature
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
uterus
2
vagina
1
hindlimb muscle
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449
1
AG04450
1
AG09309
1
AG09319
1
BE2C
1
BJ
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta memory T cell
1
CMK
1
Caco-2
1
Caki2
1
D721Med
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
G401
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12801
1
GM12864
1
GM12865
Organ
3
brain
Life stage
3
adult
Date released
6
September, 2022
2
February, 2021
1
January, 2020
1
June, 2020
1
May, 2020
Software used
2
encode-ccres
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
October, 2022
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR283BCL
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE caudate nucleus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR264OSM
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE caudate nucleus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR775JNR
released
Annotation file set
: Accessible chromatin annotation of brain caudate nucleus from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP