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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
1
Target gene links
Annotation type Category
6
RNA-seq
5
ATAC-seq
4
DNase-seq
2
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
8
endothelial cell of umbilical vein
4
ascending aorta
4
coronary artery
4
dermis blood vessel endothelial cell
4
tibial artery
2
aorta
2
brain microvascular endothelial cell
2
fibroblast of pulmonary artery
2
kidney capillary endothelial cell
2
pulmonary artery endothelial cell
2
thoracic aorta
1
brain microvascular endothelial cell
1
fibroblast of the aortic adventitia
1
smooth muscle cell of the coronary artery
Organ
4
artery
4
blood vessel
4
heart
4
vasculature
Life stage
2
adult
Date released
September, 2022
1
February, 2021
1
January, 2020
1
May, 2020
1
May, 2021
Software used
1
abc
1
deltasvm
1
encode-ccres
1
macs
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
month_released!
September, 2022
organ_slims!
ovary
Showing 4 of 4 results
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Download
FileSet
DSR019RRW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE coronary artery
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR402HCQ
released
Annotation file set
: Genetic variants with deltaSVM predictions in coronary artery DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR543XWY
released
Annotation file set
: Accessible chromatin annotation of coronary artery from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP