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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
1
Target gene links
Annotation type Category
5
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
RNA-seq
Available data
4
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
47
kidney
32
right kidney
31
renal cortex interstitium
31
renal pelvis
27
left kidney
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
9
right renal cortex interstitium
7
kidney tubule cell
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
renal cortical epithelial cell
5
HEK293
5
epithelial cell of proximal tubule
5
kidney epithelial cell
5
kidney glomerular epithelial cell
4
ACHN
4
Caki2
4
RCC 7860
4
kidney capillary endothelial cell
3
G401
3
renal cell carcinoma
2
HEK293T
1
left kidney
1
RCC
1
cortex of kidney
1
glomerular epithelium
1
renal cortex tubule
Organ
5
epithelium
5
kidney
Life stage
4
adult
Date released
2
September, 2022
1
February, 2021
1
June, 2020
1
May, 2020
Software used
2
r
1
deltasvm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
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Showing 5 of 5 results
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Download
FileSet
DSR601HVF
released
Annotation file set
: Candidate regulatory elements for BSS01092 kidney glomerular epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154FEG
released
Annotation file set
: Target gene predictions for BSS01092 kidney glomerular epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR166JYG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE kidney glomerular epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR317RFI
released
Annotation file set
: Accessible chromatin annotation for Kidney Kidney glomerular epithelial cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR299RQY
released
Annotation file set
: Variant allelic effects of kidney glomerular epithelial cell ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP