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Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
1
target gene predictions
Annotation Category
2
Gene expression levels
1
Target gene links
Annotation type Category
32
ChIP-seq
25
DNase-seq
4
snATAC-seq
3
ATAC-seq
2
RNA-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
2
tsv
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
29
islet of Langerhans
21
monocyte
17
induced pluripotent stem cell
15
CD14-positive monocyte
15
subcutaneous adipose tissue
11
EndoC_BH1
11
cardiomyocytes
11
hepatocyte
10
pituitary stalk
9
H1-hESC
9
regulatory T cell
8
T-helper 1 cell
8
kidney
8
macrophage
7
T-helper 17 cell
7
body of pancreas
7
cerebellum
7
coronary artery
7
frontal cortex
7
liver
7
neural progenitor cell
7
omental fat pad
7
putamen
7
right atrium auricular region
7
substantia nigra
7
tibial nerve
6
adipose tissue
6
amygdala
6
anterior cingulate cortex
6
caudate nucleus
6
dendritic cell
6
hypothalamus
6
lymphoblastoid cell line
6
nucleus accumbens
6
tibial artery
5
Ammon's horn
5
C1 segment of cervical spinal cord
5
adipocyte
5
ascending aorta
5
cerebellum (Hemisphere)
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
right lobe of liver
4
CD8-positive, alpha-beta T cell
4
T-helper 2 cell
4
adrenal gland
4
cardiac precursors (cardiac muscle cell)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell
4
endothelial cell of hepatic sinusoid
naive thymus-derived CD4-positive, alpha-beta T cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
stomach
4
visceral abdominal adipose tissue
3
B cell
3
T follicular helper cell
3
blood cell
3
bone tissue
3
brain
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
memory B cell
3
naive B cel
3
neutrophil
3
osteoblast
3
ovary
3
skeletal muscle tissue
3
skin of body
3
smooth muscle cell of the coronary artery
3
spleen
3
uterus
2
BJAB cell
2
CD4-positive helper T cell
2
Jurkat
2
MCF 10A cell
2
T cell
2
T-cell
2
THP-1
2
U937
2
articular chondrocyte
2
astrocyte
2
blood
2
cardiomyocytes (cardiac muscle cell)
2
cartilage tissue
2
dorsolateral prefrontal cortex
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
fibroblast
2
gamma-delta T cell
2
heart
2
heart left ventricle
2
iPSC derived cell line
2
lung
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
minor salivary gland
2
muscle
2
natural killer cell
2
pancreas
2
placenta
2
retina
2
skeletal muscle myoblast
2
small intestine
2
smooth muscle cell
2
spinal cord
2
testis
2
thyroid gland
2
transverse colon
2
trophoblast cell
2
vagina
1
A549
1
A673
1
B cell, CD19-positive
1
B-1a B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
GM12878
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
HepG2
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
Leydig cell
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
S-shaped body
1
SK-N-SH
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
aorta wall
1
beige adipocyte
1
bipolar neuron
1
bladder
1
breast
1
breast - mammary tissue
1
breast epithelium
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cerebellar hemisphere
1
cervix - ectocervix
1
cervix - endocervix
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
common myeloid progenitor, CD34-positive
1
cortex
1
cortex of kidney
1
diencephalon
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
endothelial cell of umbilical vein
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
erythroblast
1
esophagus
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fallopian tube
1
fat cell
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
gastrocnemius medialis
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
helper T cell
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
iPS DF 19.11
Date released
3
May, 2021
Software used
2
r
1
abc
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
biosample_term_name!
abdominal aorta artery
naive thymus-derived CD4-positive, alpha-beta T cell
Showing 3 of 3 results
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Download
FileSet
DSR534CRD
released
Annotation file set
: GSE118165 gene expression annotation of normal B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR630ZBK
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR143KXJ
released
Annotation file set
: enhancer-gene predicton of B_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP