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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
2
target gene predictions
Annotation Category
2
Gene expression levels
2
Target gene links
Annotation type Category
20
ChIP-seq
16
DNase-seq
4
RNA-seq
3
snATAC-seq
2
ATAC-seq
2
HiC
2
pCHi-C
2
scRNA-seq
1
H3K27ac ChIP-Seq
1
snRNA-seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
51
HeLa-S3
37
H1-hESC
19
HFFc6
16
K562
6
GM12878
6
H9
6
endothelial cell
6
lymphocyte
6
olfactory receptor cell
6
pancreatic acinar cell
6
pancreatic beta cell
6
pancreatic delta cell
6
pancreatic ductal cell
5
pancreatic alpha cell
5
pancreatic stellate cell
4
CyT49
4
HUES8
4
cardiomyocytes (cardiac muscle cell)
4
iPSC derived cell line
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
3
hepatocyte
3
kidney interstitial cell
3
nephron progenitor
3
pancreatic quiescent stellate cell
2
HCT116
2
Kupffer cell
2
S-shaped body
2
aorta
2
gamma-delta T cell
2
heart
2
heart right ventricle
2
macrophage
2
natural killer cell
2
pancreatic polypeptide-secreting cell
2
psoas muscle
2
renal vesicle
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
Schwann cell
1
T-helper 17 cell
1
activated pancreatic stellate cell
1
adult endothelial progenitor cell
1
alpha-beta T cell
1
alternatively activated macrophage
1
aortic valve
1
cardiac precursors (cardiac muscle cell)
1
cholangiocyte
1
cytotoxic T cell
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
endothelial cell of umbilical vein
1
epithelial cell of distal tubule
1
epithelial cell of proximal tubule
1
erythroid lineage cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart left ventricle
1
hepatic stellate cell
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
left cardiac atrium
1
leukocyte
1
liver
1
lymphocyte of B lineage (iPSC)
1
mast cell
1
mature B cell
1
mesangial cell
1
mesenchymal cell
1
meso-epithelial cell
1
mitral valve
1
pancreas
1
pancreatic cell
1
pancreatic epsilon cell
1
plasma cell
1
proximal tubule
1
pulmonary valve
1
quiescent pancreatic stellate cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal principal cell
1
right cardiac atrium
1
tricuspid valve
1
ureteric bud
Disease term
1
heart failure
Life stage
1
adult
Date released
2
February, 2021
2
March, 2020
Software used
2
hiccups
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR827XKT
released
Annotation file set
: RPKM gene expression levels of cardiomyocytes (cardiac muscle cell) from GSE95143 scRNA-seq of heart failure patients with dilated cardiomyopathy
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR210PMK
released
Annotation file set
: RPKM gene expression levels of cardiomyocytes (cardiac muscle cell) from GSE95143 scRNA-seq of healthy patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR804DQM
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR722REK Hi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR453PFX
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR235SPD Hi-C
Lab:
AMP-T2D consortium
Project:
AMP