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Citing CMDGA
Clear Filters
Annotation type
4
eQTL
3
pQTL
Annotation Category
7
Genetic variant effects
Annotation type Category
5239
ChIP-seq
3055
DNase-seq
549
RNA-seq
503
ATAC-seq
401
snATAC-seq
305
single cell RNA-seq
189
HiC
141
scRNA-seq
139
H3K27ac ChIP-Seq
84
snDropSeq
47
pCHi-C
17
Expression arrays
12
snRNA-seq
5
Capture-C
4
RNA microarray
3
DNA methylation profiling by array assay
3
quantitative proteomics
1
SNP-SELEX
Available data
2
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
3
liver
2
cartilage tissue
1
cerebrospinal fluid
1
subcutaneous adipose tissue
Organ
3
connective tissue
3
liver
1
adipose tissue
1
bodily fluid
Life stage
5
adult
Date released
7
August, 2021
Software used
2
fastqtl
2
peer
2
r
1
bimbam
1
haploview
1
matrix-eQTL
1
snap
Lab
5
AMP-T2D consortium
2
ITG
Project
5
AMP
2
ITG
RFA
5
AMP
2
ITG
biosample_term_name!
chorion membrane
pancreatic delta cell
Showing 7 of 7 results
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Download
FileSet
DSR561OLH
released
Annotation file set
: pQTLs from CSF levels of 1,126 proteins in 133 subjects by performing a genome-wide association analysis of 514,227 SNPs
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524ZAH
released
Annotation file set
: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR513VNX
released
Annotation file set
: eQTL annotation of subcutaneous adipose tissue from PMID:29632379
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR372LXQ
released
Annotation file set
: eQTL annotation of human liver from PMID:21637794(NCBI GEO accession: :GSE25935, GSE26105)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR970CNB
released
Annotation file set
: eQTL annotation of human liver from PMID:22006096(NCBI GEO accession: GSE32504, GSE39036)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR387ONQ
released
Annotation file set
: eQTL annotation of human liver from PMID:18462017(NCBI GEO accession: GSE9588)
Lab:
AMP-T2D consortium
Project:
AMP