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Citing CMDGA
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Annotation type
2
eQTL
1
sQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
12
snATAC-seq
10
ChIP-seq
6
DNase-seq
3
RNA-seq
1
DNA methylation profiling by array assay
1
pCHi-C
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
1
in vitro differentiated cells
0
stem cell
Biosample term
20
monocyte
10
hepatocyte
9
regulatory T cell
8
T-helper 1 cell
7
T-helper 17 cell
7
macrophage
4
T-helper 2 cell
4
endothelial cell of hepatic sinusoid
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
3
T follicular helper cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
endothelial cell
3
memory B cell
3
naive B cel
3
neutrophil
2
B cell
2
CD8-positive, alpha-beta T cell
2
T cell
2
articular chondrocyte
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
fibroblast
2
gamma-delta T cell
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
osteoblast
1
B-1a B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Leydig cell
1
S-shaped body
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
astrocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
fat cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
helper T cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney loop of Henle descending limb epithelial cell
1
kidney tubule cell
1
mesangial cell
1
mesenchymal stem cell
1
mesenchymal stem cell of adipose
1
microglial cell
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
natural killer cell
1
nephron progenitor
1
pancreatic alpha cell
1
pericardium fibroblast
1
progenitor cell
1
renal cortical epithelial cell
1
sensory neuron
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Life stage
2
adult
Date released
2
May, 2021
1
January, 2022
Software used
2
limix
1
qTLtools
1
sqtlseeker
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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FileSet
DSR786EWQ
released
Annotation file set
: neutrophil eQTL of studay BLUEPRINT from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661WZX
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR792EUZ
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP