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Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
2
variant allelic effects
Annotation Category
5
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
7
snATAC-seq
2
snRNA-seq
Available data
7
bed bed3+
3
bigWig
File set status
7
released
Genome assembly (visualization)
7
hg19
3
GRCh38
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
7
skeletal muscle fiber
5
skeletal muscle satellite cell
4
type I muscle cell
4
type II muscle cell
3
endothelial cell of lymphatic vessel
2
capillary endothelial cell
2
endothelial cell of hepatic sinusoid
2
vascular associated smooth muscle cell
1
fibroblast of the aortic adventitia
1
placental villus capillary endothelial cell
1
smooth muscle cell of the coronary artery
Organ
7
musculature of body
0
vasculature
Date released
4
February, 2024
3
November, 2021
Software used
5
macs
2
deltasvm
Lab
5
Bing Ren, UCSD
2
Stephen Parker, UMich
Project
4
AMP
3
ENCODE
RFA
3
ENCODE3
2
AMP
2
AMP2
organ_slims!
spleen
Showing 7 of 7 results
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FileSet
DSR584RYA
released
Annotation file set
: Accessible chromatin annotation of Fetal Skeletal Myocyte 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR222MBS
released
Annotation file set
: Accessible chromatin annotation of Fetal Skeletal Myocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR958BVX
released
Annotation file set
: Accessible chromatin annotation of Fetal Skeletal Myocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR887UQH
released
Annotation file set
: Cell type chromatin broad peaks and bw of neuromuscular junction from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR353GUO
released
Annotation file set
: Cell type chromatin broad peaks and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR776HHT
released
Annotation file set
: Variant allelic effects annotation of Skeletal muscle fiber type 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR640ZDY
released
Annotation file set
: Variant allelic effects annotation of Skeletal muscle fiber type 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP