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Citing CMDGA
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Annotation type
4
accessible chromatin
Annotation Category
4
cis-regulatory elements
Annotation type Category
322
ChIP-seq
281
DNase-seq
140
single cell RNA-seq
74
snDropSeq
26
RNA-seq
22
scRNA-seq
15
ATAC-seq
4
snATAC-seq
Available data
4
bed bed3+
4
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
1
kidney distal convoluted tubule epithelial cell
1
metanephros
1
parietal epithelial cell
1
ureteric bud
Organ
160
epithelium
59
connective tissue
51
pancreas
18
musculature of body
15
vasculature
14
intestine
10
lung
9
heart
7
adrenal gland
7
blood vessel
7
liver
7
stomach
6
lymphatic vessel
6
skin of body
4
bone element
4
esophagus
4
eye
4
kidney
4
mammary gland
3
bone marrow
3
bronchus
3
extraembryonic component
3
large intestine
2
embryo
2
placenta
2
small intestine
2
thyroid gland
1
artery
1
gonad
1
limb
1
ovary
1
prostate gland
1
skeleton
1
thymus
1
uterus
Life stage
1
adult
Date released
3
November, 2021
1
August, 2021
Software used
4
macs
Lab
3
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Project
3
ENCODE
1
AMP
RFA
3
ENCODE3
1
AMP2
month_released!
October, 2022
Showing 4 of 4 results
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Download
FileSet
DSR820LCR
released
Annotation file set
: Accessible chromatin annotation of Fetal Ureteric Bud Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR186LXU
released
Annotation file set
: Accessible chromatin annotation of Fetal Parietal,Chief Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR741VJV
released
Annotation file set
: Accessible chromatin annotation of Fetal Metanephric Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR197RLC
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Distal convoluted tubule
Lab:
Katalin Susztak, Upenn
Project:
AMP