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Schema
Citing CMDGA
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Assay category
7
3D chromatin structure
Assay
480
total RNA-seq
192
ChIP-seq
7
Hi-C
7
WGBS
6
RRBS
6
pCHi-C
5
single cell RNA-seq
5
small RNA-seq
2
Capture-C
1
RNA microarray
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
3
hg19
Organism
7
Homo sapiens
Biosample type
6
tissue
1
primary cell
Organ
9
pancreas
8
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
0
adipose tissue
Life stage
5
adult
1
child
1
unknown
Available data
2
bedpe bed3+
2
hic
1
bed bed3+
1
bigWig
1
hdf5
Library made from
7
DNA
Date released
5
July, 2019
2
March, 2020
Lab
7
AMP-T2D consortium
Replication type
6
unreplicated
1
isogenic
assay_slims!
DNA accessibility
Showing 7 of 7 results
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Experiment
DSR492BLD
released
Hi-C
of psoas muscle
Homo sapiens
psoas muscle male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR656CHU
released
Hi-C
of psoas muscle
Homo sapiens
psoas muscle male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR998CGE
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR851SPB
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR920BPY
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR163ZFS
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP