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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
106
total RNA-seq
34
single cell RNA-seq
6
WGBS
5
GRO-seq
4
RRBS
2
DNase-seq
1
ATAC-seq
1
FAIRE-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Organ
1
brain
Life stage
1
embryonic
1
unknown
Available data
2
bam
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
1
bed bed3+
Platform
2
Illumina HiSeq 2000
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
Run type
9
paired-ended
2
single-ended
Read length (nt)
2
36
1
101
Library made from
2
DNA
Date released
1
August, 2017
1
November, 2018
Lab
2
AMP-T2D consortium
Replication type
anisogenic
1
isogenic
1
unreplicated
assay_slims!
DNA binding
organ_slims!
pituitary gland
replication_type!
anisogenic
Showing 2 of 2 results
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Experiment
TSTSR021OZY
released
DNase-seq
of brain
Homo sapiens
brain male embryo (105 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP