Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
1
DNA accessibility
Assay
964
ChIP-seq
496
total RNA-seq
271
ATAC-seq
189
single cell RNA-seq
56
snATAC-seq
34
DNase-seq
32
pCHi-C
13
Hi-C
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
small RNA-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
FAIRE-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
3
T1D
1
AMP
RFA
3
T1D
1
AMP
Experiment status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
tissue
3
cell line
1
primary cell
Organ
1
blood vessel
1
epithelium
1
vasculature
1
vein
Life stage
3
unknown
1
newborn
Available data
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
tar
Library made from
4
DNA
Date released
3
February, 2023
1
October, 2019
Lab
3
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Replication type
4
isogenic
assay_slims!
DNA methylation
biosample_type!
tissue
files.file_type!
hdf5
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
Experiment
DSR991KIL
released
CRISPR genome editing followed by DNA sequencing
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR618IYM
released
CRISPR genome editing followed by DNA sequencing
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR351ZKB
released
CRISPR genome editing followed by DNA sequencing
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR024UHG
released
FAIRE-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP