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Schema
Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
1
pCHi-C
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Target of assay
1
control
1
transcription factor
Biosample type
3
in vitro differentiated cells
Organ
3
connective tissue
1
adipose tissue
Life stage
3
unknown
Available data
3
fastq
2
bam
2
bed bed3+
1
bed narrowPeak
1
bedpe bed3+
1
bigWig
Platform
2
Illumina HiSeq 2000
1
Illumina HiSeq 4000
Run type
2
single-ended
1
paired-ended
Read length (nt)
264
36
203
76
200
50
170
100
91
51
53
101
51
40
27
8
22
49
20
16
14
27
14
102
11
25
10
35
8
41
7
24
7
33
6
200
5
32
5
151
4
44
4
61
4
75
3
67
2
37
2
38
2
70
2
74
2
150
1
20
1
30
1
69
1
72
1
125
Library made from
3
DNA
Date released
2
August, 2017
1
August, 2018
Lab
3
AMP-T2D consortium
Replication type
2
anisogenic
1
unreplicated
assay_slims!
Transcription
assay_title!
STARR-seq
Showing 3 of 3 results
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Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR812164
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
EBF1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR465195
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
rabbit-IgG-control
Lab:
AMP-T2D consortium
Project:
AMP