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Transcription
3
DNA accessibility
2
DNA binding
1
DNA methylation
Assay
3
ATAC-seq
2
ChIP-seq
1
WGBS
1
pCHi-C
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
7
Homo sapiens
Target of assay
1
control
1
histone
1
histone modification
1
narrow histone mark
Biosample type
7
tissue
Organ
7
adipose tissue
7
connective tissue
Life stage
4
unknown
3
adult
Available data
5
bigWig
5
fastq
4
bam
2
bed bedMethyl
2
bed narrowPeak
bigBed bedMethyl
2
bigBed narrowPeak
1
tsv
Platform
2
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
3
single-ended
Read length (nt)
2
36
1
100
Mapped read length (nt)
2
36
Library made from
7
DNA
Date released
3
August, 2017
1
February, 2023
1
January, 2018
1
March, 2020
1
October, 2019
Lab
7
AMP-T2D consortium
Replication type
4
unreplicated
3
anisogenic
assay_slims!
Transcription
assay_title!
shRNA RNA-seq
files.file_type!
bigBed bedMethyl
month_released!
June, 2018
Showing 7 of 7 results
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Experiment
DSR512DPA
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR543YBS
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR511851
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR430639
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132740
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560677
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP