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Assay category
Transcription
4
3D chromatin structure
2
DNA accessibility
Assay
4
Hi-C
2
RNA microarray
2
snATAC-seq
Project
5
AMP
3
HPAP
RFA
5
AMP
3
HPAP
Experiment status
8
released
Genome assembly (visualization)
5
hg19
Organism
8
Homo sapiens
Biosample type
4
primary cell
4
tissue
Organ
5
epithelium
4
pancreas
2
kidney
1
blood vessel
1
musculature of body
1
vasculature
1
vein
Life stage
5
unknown
3
adult
Available data
fastq
4
hic
3
bedpe bed3+
3
cool
2
tsv
1
bed bed3+
1
txt
Library made from
6
DNA
2
RNA
Date released
3
October, 2022
2
December, 2019
1
August, 2022
1
May, 2022
1
October, 2019
Lab
5
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Replication type
4
anisogenic
4
unreplicated
Audit category:
210
inconsistent ontology term
8
audit script error
1
inconsistent replicate
assay_slims!
Transcription
files.file_type!
fastq
Showing 8 of 8 results
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Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR767WCG
released
Audit error
1
Hi-C
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR260JLJ
released
Audit error
1
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR127IDO
released
Audit error
1
snATAC-seq
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR479AEW
released
Audit error
1
RNA microarray
of kidney interstitium
Homo sapiens
kidney interstitium
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR187TER
released
Audit error
1
RNA microarray
of renal glomerulus
Homo sapiens
renal glomerulus
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP