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Assay category
696
DNA binding
209
Transcription
10
DNA methylation
6
DNA accessibility
Assay
3
DNase-seq
2
FAIRE-seq
1
ATAC-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
6
Homo sapiens
Biosample type
5
tissue
1
primary cell
Organ
3
pancreas
2
brain
Life stage
3
unknown
2
adult
1
embryonic
Available data
6
bam
6
bigWig
6
fastq
5
bed narrowPeak
5
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
1
bed bed3+
Platform
2
Illumina Genome Analyzer I
2
Illumina HiSeq 2000
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2500
Run type
157
paired-ended
27
unknown
6
single-ended
Read length (nt)
2
36
2
50
1
20
1
35
1
101
Library made from
6
DNA
Date released
3
August, 2017
2
November, 2018
1
October, 2017
Lab
6
AMP-T2D consortium
Replication type
3
unreplicated
2
anisogenic
1
isogenic
Showing 6 of 6 results
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Experiment
TSTSR021OZY
released
DNase-seq
of brain
Homo sapiens
brain male embryo (105 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR656713
released
ATAC-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP