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Assay category
1279
Transcription
Assay
1279
total RNA-seq
Project
1181
AMP
98
T1D
RFA
1181
AMP
98
T1D
Experiment status
1279
released
Genome assembly (visualization)
1279
hg19
1277
GRCh38
Organism
1279
Homo sapiens
Biosample type
896
tissue
152
primary cell
127
in vitro differentiated cells
104
cell line
Organ
468
connective tissue
396
adipose tissue
324
pancreas
159
liver
76
epithelium
69
heart
58
blood vessel
58
bone element
58
vasculature
54
artery
14
embryo
11
kidney
5
brain
4
limb
4
musculature of body
4
nerve
1
pericardium
Life stage
914
adult
281
unknown
63
embryonic
24
child
2
newborn
Available data
1278
bigWig
1276
bam
1276
tsv
139
fastq
2
bed bed3+
Platform
136
Illumina HiSeq 2000
9
Illumina Genome Analyzer IIx
2
Illumina NextSeq 500
Run type
124
paired-ended
15
single-ended
Read length (nt)
123
101
15
100
5
50
2
75
Library insert size (nt)
89
>200
15
225-275
Library made from
1211
RNA
68
DNA
Date released
545
February, 2021
188
May, 2020
175
May, 2021
116
July, 2018
89
August, 2017
44
July, 2019
26
September, 2018
20
November, 2019
16
October, 2019
15
August, 2021
15
February, 2018
13
March, 2020
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
May, 2023
Lab
1181
AMP-T2D consortium
98
Kyle Gaulton, UCSD
Replication type
1086
unreplicated
142
anisogenic
51
isogenic
Audit category:
127
inconsistent ontology term
Showing 25 of 1279 results
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Experiment
DSR143FTF
released
total RNA-seq
of H1-hESC
Homo sapiens
H1-hESC
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR307PEB
released
total RNA-seq
of H1-hESC
Homo sapiens
H1-hESC