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Assay category
5
Transcription
Assay
5
single cell RNA-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
in vitro differentiated cells
Organ
1
epithelium
1
pancreas
Life stage
3
adult
2
unknown
Available data
5
tsv
3
bam
3
bigWig
3
fastq
Platform
3
Illumina HiSeq 2000
Run type
3
single-ended
Read length (nt)
3
43
Library insert size (nt)
3
>100
Library made from
5
RNA
Date released
2
December, 2019
2
July, 2018
1
June, 2018
Lab
5
AMP-T2D consortium
Replication type
anisogenic
3
unreplicated
2
isogenic
Audit category:
7
audit script error
5
inconsistent ontology term
files.read_length!
105
replication_type!
anisogenic
Showing 5 of 5 results
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Experiment
DSR690SBQ
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR054HMA
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR824095
released
Audit error
1
single cell RNA-seq
of unclassified exocrine cell
Homo sapiens
unclassified exocrine cell male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR902213
released
Audit error
1
single cell RNA-seq
of unclassified exocrine cell
Homo sapiens
unclassified exocrine cell male adult (23 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR478924
released
Audit error
1
single cell RNA-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell (expressing MHC class II genes) male adult (43 years)
Lab:
AMP-T2D consortium
Project:
AMP