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Schema
Citing CMDGA
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Assay category
3
DNA methylation
2
DNA binding
1
Transcription
Assay
ATAC-seq
3
WGBS
2
ChIP-seq
1
pCHi-C
1
total RNA-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
4
GRCh38
2
hg19
Organism
7
Homo sapiens
Target of assay
1
control
1
histone
1
histone modification
1
narrow histone mark
Biosample type
7
tissue
Organ
7
adipose tissue
7
connective tissue
Life stage
5
adult
1
child
1
unknown
Available data
5
fastq
4
bam
3
bigWig
2
bed bedMethyl
2
bigBed bedMethyl
1
bed narrowPeak
1
bigBed narrowPeak
1
tsv
Platform
3
Illumina HiSeq 2500
2
Illumina HiSeq 2000
Run type
5
single-ended
Read length (nt)
3
100
2
36
Mapped read length (nt)
2
36
Library made from
6
DNA
1
RNA
Date released
February, 2021
5
August, 2017
1
March, 2020
1
May, 2023
Lab
7
AMP-T2D consortium
Replication type
6
unreplicated
1
anisogenic
assay_title!
ATAC-seq
month_released!
February, 2021
organ_slims!
stomach
Showing 7 of 7 results
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Experiment
DSR720HHB
released
total RNA-seq
of adipose tissue
Homo sapiens
adipose tissue female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR162898
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR031119
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR430639
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132740
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560677
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP