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Schema
Citing CMDGA
Clear Filters
Assay category
3
DNA accessibility
3
DNA binding
1
DNA methylation
1
Transcription
Assay
3
ChIP-seq
3
DNase-seq
1
RRBS
1
total RNA-seq
Project
8
AMP
RFA
8
AMP
Experiment status
8
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
8
Homo sapiens
Target of assay
2
control
2
histone
2
histone modification
narrow histone mark
1
RNA binding protein
1
transcription factor
Biosample type
7
primary cell
1
in vitro differentiated cells
Organ
8
connective tissue
8
heart
Life stage
3
adult
3
unknown
2
embryonic
Available data
7
bam
5
bigWig
4
bed narrowPeak
4
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Library made from
7
DNA
1
RNA
Date released
6
June, 2019
1
July, 2019
1
May, 2021
Lab
8
AMP-T2D consortium
Replication type
3
isogenic
3
unreplicated
2
anisogenic
Audit category:
4
inconsistent ontology term
assay_title!
CRISPRi RNA-seq
organ_slims!
ovary
target.investigated_as!
narrow histone mark
Showing 8 of 8 results
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Experiment
DSR571WJJ
released
total RNA-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR253RYM
released
Audit error
1
RRBS
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR110FEN
released
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female embryo (94 days) and female embryo (98 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR921CZK
released
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR712MHV
released
Audit error
1
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR563PGZ
released
Audit error
1
ChIP-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female adult
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR021YAN
released
Audit error
1
ChIP-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female adult
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR553USJ
released
ChIP-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP