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Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
5
transcription factor
Biosample type
5
tissue
Organ
3
pancreas
2
adipose tissue
2
connective tissue
Life stage
5
unknown
Available data
5
bam
5
bed bed3+
5
bigWig
5
fastq
Platform
7
Illumina NovaSeq 6000
5
Illumina HiSeq 2000
Run type
5
single-ended
Read length (nt)
131
101
114
50
101
76
75
100
43
51
30
40
27
36
27
43
14
102
7
49
6
200
4
61
2
37
1
30
1
125
Library made from
5
DNA
Date released
5
August, 2017
Lab
5
AMP-T2D consortium
Replication type
5
anisogenic
Audit category:
5
missing controlled_by
assay_title!
CRISPRi RNA-seq
files.read_length!
51
Showing 5 of 5 results
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Experiment
TSTSR957689
released
Audit not_compliant
1
ChIP-seq
of white adipose tissue
Homo sapiens
white adipose tissue
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR725045
released
Audit not_compliant
1
ChIP-seq
of white adipose tissue
Homo sapiens
white adipose tissue
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR570121
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (46 years) and male (64 years)
Target:
NKX6.1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR797006
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (58 years) and female (63 years)
Target:
NKX2.2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR213602
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans NONE and female (63 years)
Target:
MAFB
Lab:
AMP-T2D consortium
Project:
AMP