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Citing CMDGA
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Assay category
4
DNA binding
2
DNA accessibility
Assay
4
ChIP-seq
2
DNase-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
4
transcription factor
Biosample type
6
tissue
Organ
6
liver
Life stage
2
adult
2
child
2
embryonic
Available data
6
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
6
fastq
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Platform
5
Illumina HiSeq 2000
1
Illumina HiSeq 2500
1
Illumina HiSeq 4000
Run type
4
single-ended
2
paired-ended
Read length (nt)
4
50
2
36
Library made from
6
DNA
Date released
193
May, 2020
52
August, 2017
40
May, 2022
38
December, 2017
6
November, 2018
6
October, 2019
3
July, 2019
3
March, 2020
1
February, 2021
Lab
6
AMP-T2D consortium
Replication type
4
isogenic
1
anisogenic
1
unreplicated
assay_title!
MeRIP-seq
month_released!
June, 2018
Showing 6 of 6 results
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Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR869ANN
released
DNase-seq
of liver
Homo sapiens
liver female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR163QPN
released
ChIP-seq
of liver
Homo sapiens
liver female child (4 years)
Target:
SP1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR760MQH
released
ChIP-seq
of liver
Homo sapiens
liver female child (4 years)
Target:
EGR1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR820UKW
released
ChIP-seq
of liver
Homo sapiens
liver male adult (32 years)
Target:
RXRA
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR042RVE
released
ChIP-seq
of liver
Homo sapiens
liver male adult (32 years)
Target:
SP1
Lab:
AMP-T2D consortium
Project:
AMP