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Citing CMDGA
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Assay category
7
DNA accessibility
Assay
7
ATAC-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
7
hg19
2
GRCh38
Organism
7
Homo sapiens
Biosample type
5
tissue
1
cell line
1
primary cell
Organ
4
bone element
4
skeleton
1
brain
1
connective tissue
1
liver
Life stage
5
embryonic
unknown
2
adult
Available data
2729
bam
2573
bigWig
1546
bed narrowPeak
1267
tsv
1128
fastq
979
bigBed narrowPeak
300
tagAlign
284
bed broadPeak
248
bigBed broadPeak
193
bed bed3+
157
txt
112
zippedFastqFolder
64
xls
18
bedpe bed3+
18
hic
8
bed bedMethyl
8
bigBed bedMethyl
8
csv
7
bed bed3
4
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
Library made from
7
DNA
Date released
5
February, 2023
2
February, 2021
Lab
7
AMP-T2D consortium
Replication type
6
anisogenic
1
isogenic
Audit category:
1
inconsistent replicate
assay_title!
WGBS
lab.title!
Xin Sun, UCSD
replicates.library.biosample.life_stage!
unknown
Showing 7 of 7 results
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Experiment
DSR220GPB
released
ATAC-seq
of pubis
Homo sapiens
pubis embryo (53 days) and embryo (54 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR959KAQ
released
ATAC-seq
of ischium
Homo sapiens
ischium embryo (53 days) and embryo (54 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR110RMI
released
ATAC-seq
of ilium
Homo sapiens
ilium embryo (53 days) and embryo (54 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR393NZK
released
ATAC-seq
of brain
Homo sapiens
brain embryo (53 days) and embryo (54 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR011YWG
released
ATAC-seq
of acetabular part of hip bone
Homo sapiens
acetabular part of hip bone embryo (53 days) and embryo (54 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR057RCG
released
Audit error
1
ATAC-seq
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR239QTJ
released
ATAC-seq
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP