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Schema
Citing CMDGA
Clear Filters
Assay category
3
DNA accessibility
2
3D chromatin structure
2
DNA binding
Assay
2
ChIP-seq
2
DNase-seq
2
Hi-C
1
FAIRE-seq
1
pCHi-C
Project
8
AMP
RFA
8
AMP
Experiment status
8
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
8
Homo sapiens
Target of assay
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Biosample type
7
primary cell
1
tissue
Organ
784
pancreas
689
liver
606
connective tissue
459
adipose tissue
431
epithelium
318
kidney
296
heart
165
vasculature
160
blood vessel
159
bone element
121
artery
99
brain
73
limb
62
musculature of body
60
blood
60
bodily fluid
58
eye
25
embryo
19
nerve
19
spleen
18
ureter
16
skeleton
10
lung
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Life stage
5
newborn
3
unknown
Available data
5
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tar
1
tsv
Library made from
8
DNA
Date released
6
October, 2019
2
March, 2020
Lab
8
AMP-T2D consortium
Replication type
3
isogenic
3
unreplicated
2
anisogenic
Audit category:
1
audit script error
assay_title!
snATAC-seq
target.investigated_as!
histone
Showing 8 of 8 results
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Experiment
DSR301AFI
released
pCHi-C
of esophagus
Homo sapiens
esophagus
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR024UHG
released
FAIRE-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR181TCZ
released
DNase-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR542IIT
released
DNase-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR533YQD
released
ChIP-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein male newborn
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR116KRT
released
ChIP-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein male newborn
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP