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Schema
Citing CMDGA
Clear Filters
Assay category
2
DNA binding
Assay
2
ChIP-seq
0
ATAC-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Target of assay
1
chromatin remodeller
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Biosample type
2
cell line
Organ
2
liver
Life stage
2
child
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
Platform
Illumina HiSeq 2000
3
Illumina HiSeq 2500
Run type
2
single-ended
1
paired-ended
Read length (nt)
106
36
17
40
14
27
11
25
10
100
4
35
3
32
2
76
1
101
Library made from
2
DNA
Date released
2
November, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
files.platform.term_name!
Illumina HiSeq 2000
Showing 2 of 2 results
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Experiment
TSTSR734739
released
Audit not_compliant
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR573562
released
Audit warning
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
BRD4
Lab:
AMP-T2D consortium
Project:
AMP