Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
2
DNA accessibility
Assay
36
single cell RNA-seq
4
DNase-seq
2
ATAC-seq
2
total RNA-seq
0
FAIRE-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Organ
2
epithelium
2
pancreas
Life stage
unknown
2
adult
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
Platform
27
HiSeq HighOutput V4
18
Illumina HiSeq 2000
17
Illumina HiSeq 4000
12
Illumina NovaSeq 6000
2
Illumina HiSeq 2500
2
Illumina NextSeq 500
1
Illumina Genome Analyzer I
Run type
2
paired-ended
Read length (nt)
10
76
2
41
2
50
Library made from
2
DNA
Date released
2
August, 2017
Lab
2
AMP-T2D consortium
Replication type
2
unreplicated
files.read_length!
76
replicates.library.biosample.life_stage!
unknown
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
Experiment
TSTSR066676
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (38 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR371317
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (38 years)
Lab:
AMP-T2D consortium
Project:
AMP