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Citing CMDGA
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Assay category
7
DNA accessibility
Assay
21
total RNA-seq
16
WGBS
13
ChIP-seq
12
single cell RNA-seq
7
ATAC-seq
Project
4
AMP
3
HPAP
RFA
4
AMP
3
HPAP
Experiment status
7
released
Genome assembly (visualization)
7
GRCh38
4
hg19
Organism
7
Homo sapiens
Biosample type
7
primary cell
Organ
7
epithelium
7
pancreas
Life stage
5
adult
2
child
Available data
7
bigWig
7
fastq
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
Platform
4
Illumina HiSeq 2000
3
Illumina NextSeq 500
Run type
7
paired-ended
Read length (nt)
16
50
4
102
3
41
3
76
Library made from
7
DNA
Date released
4
September, 2018
2
August, 2020
1
September, 2020
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Replication type
7
unreplicated
audit.ERROR.category!
audit script error
files.read_length!
50
month_released!
November, 2020
organ_slims!
vein
Showing 7 of 7 results
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Experiment
DSR548POI
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (31 year)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR688HHY
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR926SDH
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (47 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR986VZN
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female child (8 months)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR315AOE
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male child (17 months)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR777UBU
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (19 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR530BOP
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP