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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
113
ChIP-seq
37
single cell RNA-seq
6
WGBS
5
GRO-seq
2
ATAC-seq
2
DNase-seq
Project
2
AMP
RFA
2
AMP
Experiment status
1
archived
1
released
Genome assembly (visualization)
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Organ
1
brain
1
pancreas
Life stage
2
adult
Available data
2
bam
2
fastq
1
bed broadPeak
1
bigWig
Platform
27
HiSeq HighOutput V4
23
Illumina HiSeq 4000
18
Illumina HiSeq 2000
18
Illumina NextSeq 500
12
Illumina NovaSeq 6000
2
Illumina HiSeq 2500
Run type
1
paired-ended
1
single-ended
Read length (nt)
2
50
Library made from
2
DNA
Date released
1
March, 2019
1
October, 2017
Lab
1
AMP-T2D consortium
1
Mark McCarthy, Oxford
Replication type
1
anisogenic
1
unreplicated
audit.WARNING.category!
inconsistent control read length
lab.title!
Xin Sun, UCSD
Showing 2 of 2 results
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Experiment
TSTSR656713
released
ATAC-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR955785
archived
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (52 years) and female adult (57 years) and male adult (53 years) and male adult (54 years) and male adult (59 years)
Lab:
Mark McCarthy, Oxford
Project:
AMP