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Assay category
5
DNA accessibility
Assay
127
ChIP-seq
5
ATAC-seq
5
GRO-seq
5
total RNA-seq
1
FAIRE-seq
1
Hi-C
Project
5
AMP
RFA
39
HPAP
5
AMP
Experiment status
4
released
1
archived
Genome assembly (visualization)
4
GRCh38
3
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Organ
4
pancreas
3
epithelium
1
brain
Life stage
4
adult
1
unknown
Available data
5
bam
5
fastq
4
bigWig
3
bed narrowPeak
3
bigBed narrowPeak
1
bed broadPeak
Platform
3
Illumina NextSeq 500
2
Illumina HiSeq 2500
Run type
4
paired-ended
1
single-ended
Read length (nt)
26
100
14
102
5
50
3
41
Library made from
5
DNA
Date released
September, 2017
3
August, 2017
1
March, 2019
1
October, 2017
Lab
4
AMP-T2D consortium
1
Mark McCarthy, Oxford
Replication type
4
unreplicated
1
anisogenic
files.read_length!
76
month_released!
September, 2017
Showing 5 of 5 results
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Experiment
TSTSR656713
released
ATAC-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR955785
archived
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (52 years) and female adult (57 years) and male adult (53 years) and male adult (54 years) and male adult (59 years)
Lab:
Mark McCarthy, Oxford
Project:
AMP
Experiment
TSTSR318132
released
ATAC-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR066676
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (38 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR371317
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (38 years)
Lab:
AMP-T2D consortium
Project:
AMP