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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
450
ChIP-seq
28
total RNA-seq
6
pCHi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
ATAC-seq
2
Hi-C
2
HiChIP
1
DNase-seq
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
159
tissue
129
primary cell
42
in vitro differentiated cells
2
cell line
Organ
19
epithelium
pancreas
artery
8
blood vessel
8
heart
8
vasculature
1
blood
1
bodily fluid
1
liver
Life stage
2
adult
Available data
1
bam
1
bed bed3
1
bed narrowPeak
1
bigWig
Library made from
2
DNA
Date released
1
February, 2021
1
January, 2018
Lab
2
AMP-T2D consortium
Replication type
1
isogenic
1
unreplicated
Audit category:
1
inconsistent replicate
month_released!
August, 2017
organ_slims!
artery
pancreas
Showing 2 of 2 results
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Experiment
DSR057RCG
released
Audit error
1
ATAC-seq
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR841124
released
ATAC-seq
of GM12878
Homo sapiens
GM12878
Lab:
AMP-T2D consortium
Project:
AMP