Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
5
DNA accessibility
Assay
467
total RNA-seq
102
ChIP-seq
9
DNase-seq
5
ATAC-seq
4
single cell RNA-seq
3
small RNA-seq
2
WGBS
1
pCHi-C
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Organ
65
pancreas
24
epithelium
12
heart
11
blood vessel
11
vasculature
10
artery
8
bone element
8
limb
8
skeleton
5
connective tissue
3
adipose tissue
3
liver
2
brain
1
nerve
1
spleen
Life stage
4
adult
1
unknown
Available data
9
bigWig
8
bed narrowPeak
6
bed bed3
5
bam
4
bed bed3+
4
bed bedgraph
4
bigBed narrowPeak
2
fastq
Platform
2
Illumina HiSeq 4000
Run type
2
paired-ended
Read length (nt)
2
100
Library made from
5
DNA
Date released
1
August, 2017
1
February, 2021
1
November, 2019
1
November, 2020
1
October, 2017
Lab
5
AMP-T2D consortium
Replication type
3
unreplicated
2
anisogenic
Audit category:
1
inconsistent ontology term
organ_slims!
embryo
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
Experiment
DSR812NZM
released
ATAC-seq
of osteoblast
Homo sapiens
osteoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR239QTJ
released
ATAC-seq
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR985JSV
released
Audit error
1
ATAC-seq
of adipose tissue(adipose white tissue)
Homo sapiens
adipose white tissue (adipose tissue) male adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR914451
released
ATAC-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560092
released
ATAC-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP