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Schema
Citing CMDGA
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Assay category
6
DNA accessibility
Assay
398
total RNA-seq
68
ChIP-seq
6
ATAC-seq
6
WGBS
3
small RNA-seq
2
DNase-seq
2
pCHi-C
1
RNA microarray
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
3
GRCh38
Organism
6
Homo sapiens
Biosample type
6
tissue
Organ
152
pancreas
103
epithelium
75
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
25
connective tissue
23
liver
12
bone element
skeleton
8
limb
6
adipose tissue
4
brain
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Life stage
3
adult
3
unknown
Available data
4
bed narrowPeak
4
bigWig
3
bam
2
bigBed narrowPeak
2
fastq
Platform
2
Illumina HiSeq 4000
Run type
2
paired-ended
Read length (nt)
2
100
Library made from
6
DNA
Date released
1
August, 2017
1
February, 2023
1
January, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Lab
6
AMP-T2D consortium
Replication type
3
anisogenic
3
unreplicated
Audit category:
1
inconsistent ontology term
organ_slims!
skeleton
target.investigated_as!
RNA binding protein
Showing 6 of 6 results
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Experiment
DSR512DPA
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR985JSV
released
Audit error
1
ATAC-seq
of adipose tissue(adipose white tissue)
Homo sapiens
adipose white tissue (adipose tissue) male adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR543YBS
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR511851
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR914451
released
ATAC-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560092
released
ATAC-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP