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Schema
Citing CMDGA
Clear Filters
Assay category
4
DNA binding
2
Transcription
Assay
53
single cell RNA-seq
4
ChIP-seq
2
total RNA-seq
0
CRISPR RNA-seq
0
RRBS
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
4
chromatin remodeller
4
transcription factor
2
RNA binding protein
Biosample type
4
cell line
2
tissue
Organ
4
blood
4
bodily fluid
2
pancreas
Life stage
6
adult
Available data
6
bam
6
bigWig
6
fastq
4
bed narrowPeak
4
bigBed narrowPeak
2
tsv
Platform
4
Illumina HiSeq 2500
2
Illumina NextSeq 500
Run type
4
single-ended
2
paired-ended
Read length (nt)
253
36
209
101
193
76
170
100
133
50
53
51
51
40
14
27
11
25
9
35
7
33
7
49
6
75
6
200
5
32
4
44
4
61
3
67
2
37
2
38
2
70
2
74
1
30
1
72
Library made from
4
DNA
2
RNA
Date released
2
December, 2018
2
January, 2019
2
July, 2018
Lab
6
AMP-T2D consortium
Replication type
4
isogenic
2
anisogenic
Audit category:
1
inconsistent control
Showing 6 of 6 results
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Experiment
TSTSR421QMO
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
KDM1A
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR150EUS
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
RBBP5
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR954QFA
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
ASH2L
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR362FXX
released
Audit error
1
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
HDAC2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR028148
released
total RNA-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (37 years) and female adult (55 years) and male adult (52 years) and male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR752483
released
total RNA-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (48 years) and male adult (22 years) and male adult (23 years)
Lab:
AMP-T2D consortium
Project:
AMP