Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
1
Transcription
Assay
1692
ChIP-seq
1394
total RNA-seq
424
ATAC-seq
299
single cell RNA-seq
86
RNA microarray
83
snATAC-seq
55
pCHi-C
28
WGBS
23
Hi-C
18
small RNA-seq
15
RRBS
5
DNase-seq
GRO-seq
5
STARR-seq
4
FAIRE-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
5
AMP
1
community
RFA
5
AMP2
1
community
Experiment status
6
released
Organism
5
Homo sapiens
Biosample type
5
cell line
1
stem cell
Organ
2
kidney
2
liver
Life stage
5
unknown
Library made from
5
RNA
Date released
5
August, 2021
1
March, 2023
Lab
5
Bing Ren, UCSD
1
Anna Gloyn, Oxford
Replication type
4
isogenic
2
unreplicated
Audit category:
1
inconsistent ontology term
assay_title!
GRO-seq
files.file_type!
bed bed3+
organ_slims!
epithelium
Showing 6 of 6 results
table-tab-icon
matrix-icon
Experiment
DSR694EST
released
CRISPR RNA-seq
of SB Ad3.1
Lab:
Anna Gloyn, Oxford
Project:
community
Experiment
DSR433YZO
released
Audit error
1
STARR-seq
of Synthesized DNA
Homo sapiens
Synthesized DNA
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR894OMX
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR661CGV
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR090FJR
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR594DXF
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP