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Schema
Citing CMDGA
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Assay category
2
3D chromatin structure
Assay
65
ChIP-seq
30
total RNA-seq
4
WGBS
3
pCHi-C
2
ATAC-seq
2
Hi-C
2
RRBS
2
STARR-seq
1
DNase-seq
1
single cell RNA-seq
1
whole genome sequencing assay
0
CRISPR genome editing followed by DNA sequencing
Project
2
AMP
RFA
1
AMP
1
AMP2
Experiment status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Organ
8
pancreas
6
epithelium
6
musculature of body
4
limb
3
blood vessel
3
heart
3
vasculature
2
liver
2
vein
1
kidney
Life stage
1
adult
1
unknown
Available data
2
bedpe bed3+
2
hic
1
bed bed3+
bigWig
1
hdf5
Platform
Illumina HiSeq 2000
Library made from
2
DNA
Date released
1
August, 2021
1
March, 2020
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
2
unreplicated
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bigWig
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Illumina HiSeq 2000
Showing 2 of 2 results
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Experiment
DSR744JJN
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR477FKL
released
Hi-C
of liver
Homo sapiens
liver male adult (32 years)
Lab:
AMP-T2D consortium
Project:
AMP