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Schema
Citing CMDGA
Clear Filters
Assay category
3
3D chromatin structure
Assay
106
single cell RNA-seq
76
ATAC-seq
74
total RNA-seq
43
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Project
7
AMP
RFA
5
AMP2
2
AMP
Experiment status
7
released
Genome assembly (visualization)
4
hg19
Organism
7
Homo sapiens
Biosample type
3
cell line
2
in vitro differentiated cells
2
tissue
Organ
3
pancreas
2
connective tissue
2
epithelium
1
kidney
1
liver
Life stage
5
unknown
2
adult
Available data
2
bed bed3+
2
bedpe bed3+
2
hic
Library made from
7
DNA
Date released
10
March, 2020
8
July, 2019
7
August, 2021
5
October, 2019
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
1
Katalin Susztak, Upenn
Replication type
4
unreplicated
3
anisogenic
Audit category:
2
inconsistent ontology term
month_released!
September, 2018
organ_slims!
pericardium
Showing 7 of 7 results
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Experiment
DSR398PHK
released
Audit error
1
Capture-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR818RUI
released
Audit error
1
Capture-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR976OUK
released
Capture-C
of osteoblast
Homo sapiens
osteoblast
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR621POD
released
Capture-C
of adipocyte
Homo sapiens
adipocyte
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR744JJN
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR942HZR
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR145PQU
released
Hi-C
of kidney
Homo sapiens
kidney female adult (63 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP