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Assay
1871
ChIP-seq
1527
total RNA-seq
526
ATAC-seq
369
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
56
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
7
AMP
RFA
5
AMP2
2
AMP
Experiment status
7
released
Organism
7
Homo sapiens
Biosample type
7
cell line
Organ
2
epithelium
2
kidney
2
liver
2
pancreas
Life stage
7
unknown
Library made from
5
RNA
2
DNA
Date released
7
August, 2021
Lab
5
Bing Ren, UCSD
2
AMP-T2D consortium
Struan F.A. Grant, CHOP
Replication type
4
isogenic
3
unreplicated
Audit category:
3
inconsistent ontology term
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
bone marrow
Showing 7 of 7 results
table-tab-icon
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Experiment
DSR398PHK
released
Audit error
1
Capture-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR818RUI
released
Audit error
1
Capture-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR433YZO
released
Audit error
1
STARR-seq
of Synthesized DNA
Homo sapiens
Synthesized DNA
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR894OMX
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR661CGV
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR090FJR
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR594DXF
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP