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Assay
1871
ChIP-seq
1527
total RNA-seq
531
ATAC-seq
369
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
57
pCHi-C
31
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
7
AMP
RFA
5
AMP
2
AMP2
Experiment status
7
released
Genome assembly (visualization)
2
hg19
Organism
7
Homo sapiens
Biosample type
3
tissue
2
cell line
2
in vitro differentiated cells
Organ
3
kidney
2
connective tissue
2
epithelium
2
pancreas
Life stage
5
unknown
3
adult
Available data
3
tsv
2
bed bed3+
Library made from
4
DNA
3
RNA
Date released
4
August, 2021
3
February, 2021
Lab
5
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Replication type
4
anisogenic
3
unreplicated
Audit category:
2
inconsistent ontology term
month_released!
October, 2022
month_released!!
October, 2022
Showing 7 of 7 results
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Experiment
DSR398PHK
released
Audit error
1
Capture-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR818RUI
released
Audit error
1
Capture-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR976OUK
released
Capture-C
of osteoblast
Homo sapiens
osteoblast
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR621POD
released
Capture-C
of adipocyte
Homo sapiens
adipocyte
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR983MYO
released
snDrop-seq
of kidney (medulla)
Homo sapiens
kidney male adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR718NCQ
released
snDrop-seq
of kidney (Cortex-Medulla)
Homo sapiens
kidney male adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR684WPX
released
snDrop-seq
of kidney (cortex)
Homo sapiens
kidney NONE and female adult and male adult
Lab:
AMP-T2D consortium
Project:
AMP