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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
31
transcription factor
13
control
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
2
RNA binding protein
2
chromatin remodeller
Biosample type
in vitro differentiated cells
3
tissue
1
stem cell
Organ
3
liver
Life stage
3
adult
1
unknown
Available data
4
bam
4
bed narrowPeak
4
bigWig
4
fastq
3
bigBed narrowPeak
1
bed bed3+
Platform
4
Illumina HiSeq 2500
Run type
4
single-ended
Read length (nt)
3
76
1
36
1
50
Library made from
4
DNA
Date released
89
August, 2017
66
May, 2021
58
May, 2019
55
October, 2019
50
November, 2017
37
April, 2019
20
May, 2024
19
October, 2018
17
September, 2018
10
October, 2017
8
June, 2019
6
November, 2019
4
December, 2017
4
January, 2019
2
August, 2021
Lab
4
AMP-T2D consortium
Replication type
3
unreplicated
1
isogenic
Audit category:
1
inconsistent control read length
assay_title!
Capture-C
biosample_type!
in vitro differentiated cells
Showing 4 of 4 results
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Experiment
TSTSR923383
released
Audit warning
1
ChIP-seq
of hESC
Homo sapiens
hESC (embryoid body cell)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR527676
released
ChIP-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Target:
H3K9me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR767528
released
ChIP-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR876914
released
ChIP-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Target:
H3K36me3
Lab:
AMP-T2D consortium
Project:
AMP