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Citing CMDGA
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Assay category
6
DNA binding
Assay
6
ChIP-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
6
Homo sapiens
Target of assay
5
control
1
histone
1
histone modification
1
narrow histone mark
Biosample type
6
in vitro differentiated cells
Organ
120
liver
78
connective tissue
57
pancreas
54
adipose tissue
46
brain
epithelium
23
blood vessel
23
vasculature
20
heart
18
limb
13
kidney
12
musculature of body
11
nerve
9
artery
8
embryo
8
spleen
6
blood
6
bodily fluid
5
vein
4
gonad
4
ovary
3
eye
1
lymph node
Life stage
3
embryonic
3
unknown
Available data
18
bam
18
fastq
12
bed narrowPeak
bigWig
3
bed bed3+
Platform
3
Illumina Genome Analyzer IIx
3
Illumina HiSeq 2500
Run type
6
single-ended
Read length (nt)
5
36
1
50
Library made from
6
DNA
Date released
3
December, 2017
3
February, 2018
Lab
6
AMP-T2D consortium
Replication type
5
unreplicated
1
isogenic
Audit category:
1
missing controlled_by
assay_title!
WGBS
files.file_type!
bigWig
organ_slims!
epithelium
Showing 6 of 6 results
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Experiment
TSTSR198993
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR903937
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR207909
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR236798
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR020690
released
Audit not_compliant
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR537658
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP