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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
3
RRBS
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
4
Homo sapiens
Target of assay
2
control
2
transcription factor
1
RNA binding protein
Biosample type
3
tissue
1
cell line
Organ
3
liver
1
blood
1
bodily fluid
Life stage
64
child
38
unknown
25
embryonic
4
adult
Available data
4
bam
4
fastq
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
Platform
93
Illumina HiSeq 2000
66
Illumina HiSeq 4000
45
Illumina HiSeq 2500
4
Illumina Genome Analyzer IIx
3
Illumina Genome Analyzer
2
Applied Biosystems SOLiD System 3 Plus
Run type
4
single-ended
Read length (nt)
4
36
1
50
Library made from
4
DNA
Date released
3
December, 2017
1
January, 2019
Lab
4
AMP-T2D consortium
Replication type
3
anisogenic
1
isogenic
assay_title!
single cell RNA-seq
lab.title!
Kyle Gaulton, UCSD
Showing 4 of 4 results
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Experiment
TSTSR597UEC
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR981226
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
RAD21
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR296175
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR485515
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
rabbit-IgG-control
Lab:
AMP-T2D consortium
Project:
AMP