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Citing CMDGA
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Assay category
3
DNA binding
1
Transcription
Assay
3
ChIP-seq
2
total RNA-seq
1
pCHi-C
1
single cell RNA-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
4
Homo sapiens
Target of assay
2
transcription factor
1
RNA binding protein
1
control
Biosample type
4
tissue
Organ
4
liver
Life stage
4
adult
3
child
Available data
6
bam
6
fastq
4
bed narrowPeak
4
bigWig
bed bed3+
2
bigBed narrowPeak
1
csv
Platform
3
Illumina Genome Analyzer IIx
Run type
3
single-ended
Read length (nt)
3
36
Library made from
3
DNA
1
RNA
Date released
3
December, 2017
1
February, 2021
Lab
4
AMP-T2D consortium
Replication type
103
unreplicated
36
isogenic
4
anisogenic
files.file_type!
bed bed3+
month_released!
September, 2018
Showing 4 of 4 results
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Experiment
DSR373SNC
released
single cell RNA-seq
of liver
Homo sapiens
liver female adult (41 year) and male adult (21 year) and male adult (26 years) and male adult (44 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR981226
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
RAD21
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR296175
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR485515
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
rabbit-IgG-control
Lab:
AMP-T2D consortium
Project:
AMP